courses:bin:tutorials:start [CourseWare Wiki]

Tutorial	Date	Tutor	Topic	Links
1	14.2.	PR	Introduction, first assignment, bioinformatics databases	Tutorial 1
2	21.2.	PR	de Bruijn graphs and OLC approaches, Velvet tutorial	Tutorial 2
3	28.2.	PR	Sequence alignment, second assignment	Tutorial 3
4	7.3.	PR	BLAST, Star alignment, Clustal Omega.	Tutorial 4
5	14.3.	PR	Phylogenetic trees - distance based methods	Tutorial 5
6	21.3.	PR	Phylogenetic trees - parsimony and probabilistic approaches	Tutorial 6
7	28.3.	PR	Hidden Markov models. Third assignment	Tutorial 7
8	4.4.	PR	Hidden Markov models, Fourth assignment	Tutorial 8
9	11.4.	PR	Gene expression analysis	Tutorial 9
-	18.4.	-	Easter Monday
10	25.4.	JK	Gene Ontology – enrichment analysis.	Tutorial 10
11	2.5.	JK	Gene Ontology – protein annotation. Fifth assignment.	Assignment 5
12	9.5.	JK	Protein structure prediction, Modeller.	Tutorial 11
13	16.5.	JK	Motif discovery.	Tutorial 12
14	-	JK	Wrap up, submissions, credits, exam.

Assignment	Alternative assignment	Points
WEB SEARCH	No choice	5 p.
SEQUENCE ALIGNMENT	BLAST ALIGNMENT	15 p.
CpG-ISLAND RECOGNITION	Exons	5 p.
GENE FINDING	Exons	15 p.
PROTEIN FUNCTION PREDICTION	Three options to approach	10 p.