CourseWare Wiki
Switch Term
Summer 2023 / 2024
Summer 2022 / 2023
Summer 2021 / 2022
Summer 2020 / 2021
Summer 2019 / 2020
Summer 2018 / 2019
Summer 2017 / 2018
Search
Log In
b232
courses
bin
tutorials
Differences
This shows you the differences between two versions of the page.
View differences:
Side by Side
Inline
Go
Link to this comparison view
Both sides previous revision
Previous revision
2024/02/14 16:10 rysavpe1 [Assignment list]
2024/02/14 14:14 rysavpe1 [Tutorials]
2024/02/09 10:17 external edit
Go
Previous revision
2024/02/14 16:10 rysavpe1 [Assignment list]
2024/02/14 14:14 rysavpe1 [Tutorials]
2024/02/09 10:17 external edit
Go
Last revision
Both sides next revision
courses:bin:tutorials:start [2019/04/29 11:20]
courses:bin:tutorials:start [2024/02/14 14:14]
rysavpe1
[Tutorials]
Line 1:
Line 1:
+
==== Tutorials =====
+
^ Tutorial ^ Date ^ Tutor ^ Topic ^ Links ^
+
| 1 | 19.2.| PR | Introduction, first assignment, bioinformatics databases | [[courses:bin:tutorials:tutorial1|Tutorial 1]] |
+
| 2 | 26.2.| PR | de Bruijn graphs and OLC approaches, Velvet tutorial | [[courses:bin:tutorials:tutorial2|Tutorial 2]] |
+
| 3 | 4.3.| PR | Sequence alignment, second assignment | [[courses:bin:tutorials:tutorial3|Tutorial 3]] |
+
| 4 | 11.3.| PR | BLAST, Star alignment, Clustal Omega. | [[courses:bin:tutorials:tutorial4|Tutorial 4]] |
+
| 5 | 18.3.| JK | Motif discovery. |[[courses:bin:tutorials:tutorial12|Tutorial 12]] |
+
| 6 | 25.3.| PR | Phylogenetic trees - distance based methods | [[courses:bin:tutorials:tutorial5|Tutorial 5]] |
+
| - | 1.4.| - | //Easter Monday// |
+
| 7 | 8.4.| PR | Phylogenetic trees - parsimony and probabilistic approaches | [[courses:bin:tutorials:tutorial6|Tutorial 6]] |
+
| 8 | 15.4.| PR | Hidden Markov models. Third assignment | [[courses:bin:tutorials:tutorial7|Tutorial 7]] |
+
| 9 | 22.4.| PR | Hidden Markov models, Fourth assignment | [[courses:bin:tutorials:tutorial8|Tutorial 8]] |
+
| 10 | 29.4.| PR | Gene expression analysis | [[courses:bin:tutorials:tutorial9|Tutorial 9]] |
+
| 11 | 6.5.| JK | Gene Ontology -- enrichment analysis. | [[courses:bin:tutorials:tutorial10|Tutorial 10]] |
+
| 12 | 13.5.| JK | Gene Ontology -- protein annotation. Fifth assignment. | [[courses:bin:assignments:hw5|Assignment 5]] |
+
| 13 | 20.5.| JK | Protein structure prediction, Modeller. |[[courses:bin:tutorials:tutorial11|Tutorial 11]]|
+
+
+
+
====Assignment list====
+
^ Assignment ^ Alternative assignment ^ Points ^
+
|[[../assignments/hw1|WEB SEARCH]] | No choice | 5 p. |
+
|[[../assignments/hw2b|BLAST ALIGNMENT]] | No choice | 15 p. |
+
|[[../assignments/hw3|CpG-ISLAND RECOGNITION]] | [[../assignments/hw34|Exons]] | 5 p. |
+
|[[../assignments/hw4|GENE FINDING]] | [[../assignments/hw34|Exons]] | 15 p. |
+
|[[../assignments/hw5|PROTEIN FUNCTION PREDICTION]] | Three options to approach | 10 p. |
courses/bin/tutorials/start.txt
· Last modified: 2024/02/14 16:10 by
rysavpe1