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This shows you the differences between two versions of the page.

--- courses:bin:program [2024/02/19 10:20]
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+++ courses:bin:program [2024/02/26 17:31]
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 ^  Lecture  ^  Date    ^  Lecturer  ^  Topics  ^  Slides   ^  References  ^
 |  1         |  19.2.   |  JK  | Intro, sample bioinformatics tasks. | {{bin_intro.pdf|intro}} |
-|  2         |  26.2.  |  JK  | Sequencing algorithms, fragment assembly. | {{bin_assembly.pdf|assembly}} | [[https://makarich.fbb.msu.ru/snaumenko/ngs_lecture/sequence_assembly_demistified2013.pdf|Nagarajan13]], [[http://profs.scienze.univr.it/~liptak/MBD/files/nbt.2023.pdf|Compeau11]] |
+|  2         |  26.2.  |  JK  | Sequencing algorithms, fragment assembly. | {{bin_assembly.pdf|assembly}} | [[http://bioinformatics.hgen.slu.se/SLUBIOINFO2015/SLUBIOINFO2015/Literature_files/assembly_review.PDF|Nagarajan13]], [[http://profs.scienze.univr.it/~liptak/MBD/files/nbt.2023.pdf|Compeau11]] |
 |  3         |   4.3.  |  JK  | Biological sequence alignment. | {{bin_align.pdf |alignment}} | Durbin's book, ch 2,6 |
 |  4         |  11.3.  |  JK  | BLAST algorithm and its modifications. | {{bin_malign.pdf|multi align}}, {{bin_blast.pdf|BLAST}} |[[http://users.cis.fiu.edu/~giri/teach/Bioinf/Papers/GappedBLASTPaperNAR97.pdf|Altschul97]] |