courses:bin:tutorials:start [CourseWare Wiki]

Tutorial	Date	Tutor	Topic	Links
1	16.2.	PR	Introduction, first assignment, bioinformatics databases	Tutorial 1
2	23.2.	PR	de Bruijn graphs and OLC approaches, Velvet tutorial	Tutorial 2
3	2.3.	PR	Sequence alignment, second assignment	Tutorial 3
4	9.3.	PR	BLAST, Star alignment, Clustal Omega.	Tutorial 4
5	16.3.	JK	Motif discovery.	Tutorial 12
6	23.3.	PR	Phylogenetic trees - distance based methods	Tutorial 5
7	30.3.	PR	Phylogenetic trees - parsimony and probabilistic approaches	Tutorial 6
-	6.4.	-	Easter Monday
8	13.4.	PR	Hidden Markov models. Third assignment	Tutorial 7
9	20.4.	PR	Hidden Markov models, Fourth assignment	Tutorial 8
10	27.4.	PR	Gene expression analysis	Tutorial 9
11	4.5.	JK	Gene Ontology – enrichment analysis.	Tutorial 10
12	11.5.	JK	Gene Ontology – protein annotation. Fifth assignment.	Assignment 5
13	18.5.	JK	Protein structure prediction – homology, ESMFold.	Tutorial 11

Assignment	Alternative assignment	Points
WEB SEARCH	No choice	5 p.
BLAST ALIGNMENT	SEQUENCE ASSEMBLY	15 p.
CpG-ISLAND RECOGNITION	Exons	5 p.
GENE FINDING	Exons	15 p.
PROTEIN FUNCTION PREDICTION	Three options to approach	10 p.