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tutorials
Tutorials
Tutorial
Date
Tutor
Topic
Links
1
19.2.
PR
Introduction, first assignment, bioinformatics databases
Tutorial 1
2
26.2.
PR
de Bruijn graphs and OLC approaches, Velvet tutorial
Tutorial 2
3
4.3.
PR
Sequence alignment, second assignment
Tutorial 3
4
11.3.
PR
BLAST, Star alignment, Clustal Omega.
Tutorial 4
5
18.3.
JK
Motif discovery.
Tutorial 12
6
25.3.
PR
Phylogenetic trees - distance based methods
Tutorial 5
-
1.4.
-
Easter Monday
7
8.4.
PR
Phylogenetic trees - parsimony and probabilistic approaches
Tutorial 6
8
15.4.
PR
Hidden Markov models. Third assignment
Tutorial 7
9
22.4.
PR
Hidden Markov models, Fourth assignment
Tutorial 8
10
29.4.
PR
Gene expression analysis
Tutorial 9
11
6.5.
JK
Gene Ontology – enrichment analysis.
Tutorial 10
12
13.5.
JK
Gene Ontology – protein annotation. Fifth assignment.
Assignment 5
13
20.5.
JK
Protein structure prediction, Modeller.
Tutorial 11
Assignment list
Assignment
Alternative assignment
Points
WEB SEARCH
No choice
5 p.
BLAST ALIGNMENT
SEQUENCE ASSEMBLY
15 p.
CpG-ISLAND RECOGNITION
Exons
5 p.
GENE FINDING
Exons
15 p.
PROTEIN FUNCTION PREDICTION
Three options to approach
10 p.
courses/bin/tutorials/start.txt
· Last modified: 2024/02/14 16:10 by
rysavpe1