==== Tutorials =====

^ Tutorial   ^  Date  ^ Tutor ^ Topic ^ Links ^                             
|  1         |  15.2. | PR  | Introduction, first assignment, bioinformatics databases | [[courses:bin:tutorials:tutorial1|Tutorial 1]] |
|  2         |  22.2. | PR  | de Bruijn graphs and OLC approaches, Velvet tutorial | [[courses:bin:tutorials:tutorial2|Tutorial 2]] |
|  3         |   1.3. | PR | Sequence alignment, second assignment | [[courses:bin:tutorials:tutorial3|Tutorial 3]] |
|  4         |   8.3. | PR  | BLAST, Star alignment, Clustal Omega. | [[courses:bin:tutorials:tutorial4|Tutorial 4]] |
|  5         |  15.3. | PR | Phylogenetic trees - distance based methods | [[courses:bin:tutorials:tutorial5|Tutorial 5]]  |
|  6         |  22.3. | PR  | Phylogenetic trees - parsimony and probabilistic approaches | [[courses:bin:tutorials:tutorial6|Tutorial 6]] |
|  7         |  29.3. | PR | Hidden Markov models. Third assignment | [[courses:bin:tutorials:tutorial7|Tutorial 7]] |
|  -         |   5.4. | -  | //Easter Monday// |
|  8         |  12.4. | PR  | Hidden Markov models, Fourth assignment | [[courses:bin:tutorials:tutorial8|Tutorial 8]] |
|  9         |  19.4. | PR  | Gene expression analysis | [[courses:bin:tutorials:tutorial9|Tutorial 9]] |
|  10        |  26.4. | JB | Gene Ontology. Genová exprese. Zadání samostatné práce GENE EXPRESSION. | [[courses:bin:tutorials:tutorial10|Tutorial 10]] |
|  11        |   3.5.  | JB  | Struktura proteinů, práce s programem Modeller. |[[courses:bin:tutorials:tutorial11|Tutorial 11]]| 
|  12        |  10.5.  | JB  | Predikce funkcí proteinů pomocí Propozicionalizace |[[courses:bin:tutorials:tutorial12|Tutorial 12]] |
|  13        |  17.5.  | JB  |Odevzdání samostatné práce: GENE FINDING, GENE EXPRESSION.|   |


====Assignment list====
^ Assignment  ^ Alternative assignment   ^  Points    ^  
|[[../assignments/hw1|WEB SEARCH]]          | No choice | 5.b  |
|[[../assignments/hw2|SEQUENCE ALIGNMENT]]  | [[../assignments/hw2b|BLAST ALIGNMENT]] | 15.b |
|[[../assignments/hw3|CpG-ISLAND RECOGNITION]]  | [[../assignments/hw34|Exons]] | 5.b  |
|[[../assignments/hw4|GENE FINDING]]     | [[../assignments/hw34|Exons]] | 15.b |
|GENE EXPRESSION     | | 10.b |